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ANR project: Code decision (reference) : ANR-13-BSV7-0015
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Knock out of specific maternal vitellogenins in zebrafish (Danio rerio) evokes vital changes in egg proteomic profiles that resemble the phenotype of poor quality eggs

Ozlem Yilmaz , Amelie Patinote , Emmanuelle Com , Charles Pineau , Julien Bobe
BMC Genomics, 2021, 22 (1), pp.308. ⟨10.1186/s12864-021-07606-1⟩
Journal articles inserm-03218476v1
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Scrambled eggs: Proteomic portraits and novel biomarkers of egg quality in zebrafish (Danio rerio)

Ozlem Yilmaz , Amélie Patinote , Thuy Thao Vi Nguyen , Emmanuelle Com , Regis Lavigne , et al.
PLoS ONE, 2017, 12 (11), pp.1-24. ⟨10.1371/journal.pone.0188084⟩
Journal articles hal-01640969v1
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foxr1 is a novel maternal-effect gene in fish that regulates embryonic cell growth via p21 and rictor

Caroline Cheung , Amélie Patinote , Yann Guiguen , Julien Bobe
2018
Preprints, Working Papers, ... hal-02790845v1

X-linked retinitis pigmentosa 2 is a novel maternal-effect gene required for left-right asymmetry in zebrafish

Thomas Desvignes , Thuy Thao Vi Nguyen , Frank Chesnel , Aurélien Bouleau , Christian Fauvel , et al.
Biology of Reproduction, 2015, 93 (2), pp.42. ⟨10.1095/biolreprod.115.130575⟩
Journal articles hal-01206344v1
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Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.

Jérémy Pasquier , Cédric Cabau , Thuy Thao Vi Nguyen , Elodie Jouanno , Dany Severac , et al.
BMC Genomics, 2016, 17 (1), pp.368. ⟨10.1186/s12864-016-2709-z⟩
Journal articles hal-01487023v1
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Double maternal effect: duplicated nucleoplasmin 2 genes, npm2a and npm2b, are shared by fish and tetrapods, and have distinct and essential roles in early embryogenesis

Caroline Cheung , Jérémy Pasquier , Aurélien Bouleau , Thuy Thao Vi Nguyen , Franck Chesnel , et al.
2020
Preprints, Working Papers, ... hal-01608935v1

Portait moléculaire d’un oeuf de poisson de bonne qualité - Maternal Legacy

Julien Bobe
[Contrat] ANR-13-BSV7-0015, INRA LPGP Laboratoire de Physiologie et Génomique des Poissons; CNRS MGX BioCampus Montpellier (Montpellier GenomiX); INRA BIA SIGENAE Institut National de la recherche Agronomique; URAFPA Université de Lorraine-Unité de Recherche Animal et Fonctionnalité des Produits Animaux; IFREMER Institut Français de Recherche pour l'exploitation de la Mer - Centre Méditerranée. 2018, 13 p
Reports hal-03139647v1

Maternal investment in fish oocytes and eggs: The molecular cargo and its contributions to fertility and early development

Esther Lubzens , Julien Bobe , Graham Young , Craig V. Sullivan
Aquaculture, 2017, Recent advances in fish gametes and embryo research, 472 (SI), pp.107-143. ⟨10.1016/j.aquaculture.2016.10.029⟩
Journal articles hal-01595234v1
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A transcriptomic comparison suggests an influence of the domestication process on egg quality in Eurasian Perch (Perca fluviatilis)

Taina Rocha de Almeida , M. Alix , B. Schaerlinger , Aurélie Le Cam , Jérôme Montfort , et al.
11. International Symposium on Reproductive Physiology of Fish, Instituto Nacional de Pesquisas da Amazônia (INPA). Manaus, BRA., Jun 2018, Manaus, Brazil. 251 p
Conference papers hal-01812820v1

Transcriptomic analysis of Eurasian perch (Perca fluviatilis) eggs assigned to distinct groups of quality

Taina Rocha de Almeida , Bérénice Schaerlinger , Aurélie Le Cam , Maud Alix , Jérôme Montfort , et al.
6. International Workshop on the Biology of Fish Gametes, University of South Bohemia in České Budějovice. CZE., Sep 2017, Vodnany, Czech Republic. 156 p
Conference papers hal-01579299v1

Maternally inherited npm2 mRNA is crucial for egg developmental competence in zebrafish.

Aurélien Bouleau , Thomas Desvignes , Juan Martin Traverso , Thuy Thao Vi Nguyen , Franck Chesnel , et al.
Biology of Reproduction, 2014, 91 (2), pp.43. ⟨10.1095/biolreprod.114.119925⟩
Journal articles hal-01120330v1

Difficulties to compare egg quality: insights from a transcriptomic analysis

Taina Rocha de Almeida , Julien Bobe , Aurélie Le Cam , Christophe C. Klopp , Jérôme Montfort , et al.
7. International Workshop on the Biology of Fish Gametes, Sep 2019, Rennes, France. pp.61-62
Conference papers hal-02282230v1
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Lost in translation: egg transcriptome reveals molecular signature to predict developmental success and novel maternal-effect genes

Caroline Cheung , Thuy Thao Vi Nguyen , Aurélie Le Cam , Amélie Patinote , Laurent Journot , et al.
2018
Preprints, Working Papers, ... hal-03169273v1

Proteomics of egg quality in zebrafish

Ozlem Yilmaz , Emmanuelle Com , Regis Lavigne , Charles Pineau , Julien Bobe
4. International Symposium on Genomics in Aquaculture, University of Nordland. NOR., Apr 2016, Athens, Greece
Conference papers hal-02742946v1
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Double maternal-effect: duplicated nucleoplasmin 2 genes, npm2a and npm2b, with essential but distinct functions are shared by fish and tetrapods

Caroline Cheung , Jérémy Pasquier , Aurélien Bouleau , Thuy Thao Vi Nguyen , Franck Chesnel , et al.
BMC Evolutionary Biology, 2018, 18 (1), pp.1-16. ⟨10.1186/s12862-018-1281-3⟩
Journal articles hal-01923030v1
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Genome editing reveals reproductive and developmental dependencies on specific types of vitellogenin in zebrafish (Danio rerio)

Ozlem Yilmaz , Amélie Patinote , Thuy Thao Vi Nguyen , Emmanuelle Com , Charles Pineau , et al.
Molecular Reproduction and Development, 2019, 86 (9), pp.1168-1188. ⟨10.1002/mrd.23231⟩
Journal articles hal-02278084v1
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Domestication may affect the maternal mRNA profile in unfertilized eggs, potentially impacting the embryonic development of Eurasian perch (Perca fluviatilis)

Taina Rocha de Almeida , Maud Alix , Aurélie Le Cam , Christophe C. Klopp , Jérôme Montfort , et al.
PLoS ONE, 2019, 14 (12), pp.1-25. ⟨10.1371/journal.pone.0226878⟩
Journal articles hal-02627554v1
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Genome-wide identification of novel ovarian-predominant miRNAs: new insights from the medaka (Oryzias latipes)

Amine Bouchareb , Aurélie Le Cam , Jérôme Montfort , Stéphanie Gay , Thuy Thao Vi Nguyen , et al.
Scientific Reports, 2017, 7 (1), pp.1-11. ⟨10.1038/srep40241⟩
Journal articles hal-01594581v1
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What makes a bad egg? Egg transcriptome reveals dysregulation of translational machinery and novel fertility genes important for fertilization

Caroline Cheung , Thuy Thao Vi Nguyen , Aurélie Le Cam , Amélie Patinote , Laurent Journot , et al.
BMC Genomics, 2019, 20:584 (1), pp.1-14. ⟨10.1186/s12864-019-5930-8⟩
Journal articles hal-02185873v1
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Maternal temperature exposure triggers emotional and cognitive disorders and dysregulation of neurodevelopment genes in fish

Violaine Colson , Morgane Cousture , Danielle Damasceno , Claudiane Valotaire , Thuy Thao Vi Nguyen , et al.
PeerJ, 2019, 7, pp.1-26. ⟨10.7717/peerj.6338⟩
Journal articles hal-01810424v2
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Foxr1 is a novel maternal-effect gene in fish that is required for early embryonic success

Caroline Cheung , Amélie Patinote , Yann Guiguen , Julien Bobe
PeerJ, 2018, 6, pp.1-20. ⟨10.7717/peerj.5534⟩
Journal articles hal-01867990v1

CRISPR/Cas9 disturbance of the multiple vitellogenin (vtg) system: essential functions of different vtg types during zebrafish egg, embryo and larval development

Ozlem Yilmaz , Amélie Patinote , Thuy Thao Vi Nguyen , Emmanuelle Com , Charles Pineau , et al.
6. International Workshop on the Biology of Fish Gametes, University of South Bohemia in České Budějovice. CZE., Sep 2017, Vodnany, Czech Republic. 156 p
Conference papers hal-01595005v1

Transcriptomic profiling of egg quality in Sea bass (Dicentrarchus labrax) sheds light on genes involved in ubiquitination and translation

Daniel Żarski , Thuy Thao Vi Nguyen , Aurélie Le Cam , Jérôme Montfort , Gilbert Dutto , et al.
Marine Biotechnology, 2017, 19 (1), pp.102-115. ⟨10.1007/s10126-017-9732-1⟩
Journal articles hal-01464069v1