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Leveraging the partition selection bias to achieve a high-quality clustering of mass spectra

 André R.F. Silva , Diogo Lima , Louise Kurt , Mathieu Dupré , Julia Chamot-Rooke , et al.
Journal of Proteomics, 2021, 245, pp.104282. ⟨10.1016/j.jprot.2021.104282⟩
Article dans une revue pasteur-03441752v1
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Potential risk of re-emergence of urban transmission of Yellow Fever virus in Brazil facilitated by competent Aedes populations.

 Dinair Couto-Lima , Yoann Madec , Maria Ignez Bersot , Stephanie Silva Campos , Monique de Albuquerque Motta , et al.
Scientific Reports, 2017, 7 (1), pp.4848. ⟨10.1038/s41598-017-05186-3⟩
Article dans une revue pasteur-01564978v1
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Concerted conformational dynamics and water movements in the ghrelin G protein-coupled receptor

 Maxime Louet , Marina Casiraghi , Marjorie Damian , Mauricio Gs Costa , Pedro Renault , et al.
eLife, 2021, 10, pp.e63201. ⟨10.7554/elife.63201⟩
Article dans une revue hal-03407524v1
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New substrates and interactors of the mycobacterial Serine/Threonine protein kinase PknG identified by a tailored interactomic approach

 Magdalena Gil , Analía Lima , Bernardina Rivera , Jéssica Rossello , Estefanía Urdániz , et al.
Journal of Proteomics, 2019, 192, pp.321-333. ⟨10.1016/j.jprot.2018.09.013⟩
Article dans une revue pasteur-02749223v1
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A novel flagellar sheath protein, FcpA, determines filament coiling, translational motility and virulence for the Leptospira spirochete

 Elsio A. Jr Wunder , Cláudio Pereira Figueira , Nadia Benaroudj , Bo Hu , Brian Tong , et al.
Molecular Microbiology, 2016, 101 (3), pp.457-470. ⟨10.1111/mmi.13403⟩
Article dans une revue pasteur-02548535v1
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A Worldwide Map of Plasmodium falciparum K13-Propeller Polymorphisms.

 Didier Ménard , Nimol Khim , Johann Beghain , Ayola A Adegnika , Mohammad Shafiul-Alam , et al.
New England Journal of Medicine, 2016, 374 (25), pp.2453-64. ⟨10.1056/NEJMoa1513137⟩
Article dans une revue pasteur-01336483v1
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Minimal information for studies of extracellular vesicles 2018 (MISEV2018): a position statement of the International Society for Extracellular Vesicles and update of the MISEV2014 guidelines

 Clotilde Thery , Kenneth Witwer , Elena Aikawa , Maria Jose Alcaraz , Johnathon Anderson , et al.
Journal of Extracellular Vesicles, 2018, 7 (1), pp.1535750. ⟨10.1080/20013078.2018.1535750⟩
Article dans une revue hal-02323217v1

Top-Down Garbage Collector: a tool for selecting high-quality top-down proteomics mass spectra

 Diogo Lima , André Silva , Mathieu Dupré , Marlon Santos , Milan Clasen , et al.
Bioinformatics, 2019, 35 (18), pp.3489-3490. ⟨10.1093/bioinformatics/btz085⟩
Article dans une revue pasteur-02330759v1
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Structural basis of flagellar filament asymmetry and supercoil templating by Leptospira spirochete sheath proteins

 Megan Brady , Fabiana San Martin , Garrett Debs , Kimberley Gibson , Azalia Rodríguez , et al.
2022
Pré-publication, Document de travail pasteur-04121056v1
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An asymmetric sheath controls flagellar supercoiling and motility in the leptospira spirochete

 Kimberley H Gibson , Felipe Trajtenberg , Elsio A. Jr Wunder , Megan R Brady , Fabiana San Martin , et al.
eLife, 2020, 9, ⟨10.7554/eLife.53672⟩
Article dans une revue pasteur-02549761v1
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Coregulation of extracellular vesicle production and fluconazole susceptibility in Cryptococcus neoformans

 Juliana Rizzo , Adèle Trottier , Frédérique Moyrand , Jean-Yves J.-Y. Coppée , Corinne Maufrais , et al.
mBio, 2023, pp.e00870-23. ⟨10.1128/mbio.00870-23⟩
Article dans une revue pasteur-04134001v1
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Projecting the end of the Zika virus epidemic in Latin America: a modelling analysis

 Kathleen M. O'Reilly , Rachel Lowe , W. John Edmunds , Philippe Mayaud , Adam Kucharski , et al.
BMC Medicine, 2018, 16 (1), pp.180. ⟨10.1186/s12916-018-1158-8⟩
Article dans une revue pasteur-03430129v1
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Land use sustainability on the South-Eastern Amazon agricultural frontier: Recent progress and the challenges ahead

 Damien Arvor , Isabelle Tritsch , Christovam Barcellos , Nicolas Jégou , Vincent Dubreuil
Applied Geography, 2017, 80, pp.86 - 97. ⟨10.1016/j.apgeog.2017.02.003⟩
Article dans une revue halshs-01491579v1
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Differential Susceptibilities of Aedes aegypti and Aedes albopictus from the Americas to Zika Virus.

 Thais Chouin-Carneiro , Anubis Vega-Rua , Marie Vazeille , André Yebakima , Romain Girod , et al.
PLoS Neglected Tropical Diseases, 2016, 10 (3), pp.e0004543. ⟨10.1371/journal.pntd.0004543⟩
Article dans une revue pasteur-01491874v1
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Chikungunya Virus Transmission Potential by Local Aedes Mosquitoes in the Americas and Europe

 Anubis Vega-Rúa , Ricardo Lourenço-De-Oliveira , Laurence Mousson , Marie Vazeille , Sappho Fuchs , et al.
PLoS Neglected Tropical Diseases, 2015, 9 (5), pp.e0003780. ⟨10.1371/journal.pntd.0003780⟩
Article dans une revue hal-01213833v1

Human DOCK11 Deficiency Causes Defective Erythropoiesis and Systemic Inflammation

 Jana Block , Christina Rashkova , Irinka Castanon , Jessica Platon , Samaneh Zoghi , et al.
Blood, 2023, 142 (Supplement 1), pp.4107-4107. ⟨10.1182/blood-2023-172795⟩
Article dans une revue hal-04355408v1
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Development and validation of serological markers for detecting recent Plasmodium vivax infection

 Rhea J Longley , Michael T White , Eizo Takashima , Jessica Brewster , Masayuki Morita , et al.
Nature Medicine, 2020, 26 (5), pp.741-749. ⟨10.1038/s41591-020-0841-4⟩
Article dans une revue pasteur-02612720v1

Genomic and epidemiological monitoring of yellow fever virus transmission potential

 N. R. Faria , M. U. G. Kraemer , S. C. Hill , J. Goes de Jesus , R. S. Aguiar , et al.
Science, 2018, 361 (6405), pp.894-899. ⟨10.1126/science.aat7115⟩
Article dans une revue hal-02629326v1
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Population genomic analysis of Cryptococcus Brazilian isolates reveals an African type subclade distribution

 Corinne Maufrais , Luciana de Oliveira , Rafael Bastos , Frédérique Moyrand , Flavia Reis , et al.
G3, 2021, 11 (6), pp.jkab107. ⟨10.1093/g3journal/jkab107⟩
Article dans une revue pasteur-03675884v1
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Detecting the macroevolutionary signal of species interactions

 Luke J Harmon , Cecilia S Andreazzi , Florence Débarre , Jonathan Drury , Emma E Goldberg , et al.
Journal of Evolutionary Biology, 2019, 32 (8), pp.769-782. ⟨10.1111/jeb.13477⟩
Article dans une revue hal-03002995v1
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Colonization and genetic diversification processes of Leishmania infantum in the Americas

 Philipp Schwabl , Mariana C Boité , Giovanni Bussotti , Arne Jacobs , Bjorn Andersson , et al.
Communications Biology, 2021, 4 (1), pp.139. ⟨10.1038/s42003-021-01658-5⟩
Article dans une revue pasteur-03210732v1
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Estimated impact of tafenoquine for Plasmodium vivax control and elimination in Brazil: A modelling study

 Narimane Nekkab , Raquel Lana , Marcus Lacerda , Thomas Obadia , André Siqueira , et al.
PLoS Medicine, 2021, 18 (4), pp.e1003535. ⟨10.1371/journal.pmed.1003535⟩
Article dans une revue pasteur-03617084v1
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Three-way interactions between mosquito population, viral strain and temperature underlying chikungunya virus transmission potential

 Karima Zouache , Albin Fontaine , Anubis Vega-Rua , Laurence Mousson , Jean-Michel Thiberge , et al.
Proceedings of the Royal Society B: Biological Sciences, 2014, 281 (1792), pp.20141078. ⟨10.1098/rspb.2014.1078⟩
Article dans une revue pasteur-01680228v1
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New machine learning and physics-based scoring functions for drug discovery

 Isabella A Guedes , André M S Barreto , Diogo Marinho , Eduardo Krempser , Mélaine A Kuenemann , et al.
Scientific Reports, 2021, 11 (1), pp.3198. ⟨10.1038/s41598-021-82410-1⟩
Article dans une revue hal-04270789v1
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[Short Communication] DiagnoTop: A Computational Pipeline for Discriminating Bacterial Pathogens without Database Search

 Diogo Borges Lima , Mathieu Dupré , Marlon Dias Mariano Santos , Paulo Costa Carvalho , Julia Chamot-Rooke
Journal of The American Society for Mass Spectrometry, 2021, 32 (6), pp.1295-1299. ⟨10.1021/jasms.1c00014⟩
Article dans une revue pasteur-03441711v1
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A simple ATAC-seq protocol for population epigenetics

 Ronaldo de Carvalho Augusto , Olivier REY , Céline Cosseau , Cristian Chaparro , Jeremie Vidal-Dupiol , et al.
Wellcome Open Research, 2021, 5, pp.121. ⟨10.12688/wellcomeopenres.15552.2⟩
Article dans une revue hal-03145575v2
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Coxiella burnetii Infection in Livestock, Pets, Wildlife, and Ticks in Latin America and the Caribbean: a Comprehensive Review of the Literature

 Loïc Epelboin , Mateus de Souza Ribeiro Mioni , Aurelie Couesnon , Mona Saout , Edith Guilloton , et al.
Current tropical medicine reports, 2023, 10 (3), pp.94-137. ⟨10.1007/s40475-023-00288-7⟩
Article dans une revue hal-04275614v1
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Les cabinets de conseil privés dans l'action publique contre les épidémies : une revue exploratoire

 Lucille Gallardo , Lara Gautier , Fanny Chabrol , Lola Traverson , Sydia Oliveira , et al.
2023
Pré-publication, Document de travail hal-03943255v1
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The genetic basis for susceptibility to Rift Valley fever disease in MBT/Pas mice.

 S Tokuda , T Z Do Valle , L Batista , D Simon-Chazottes , L Guillemot , et al.
Genes and Immunity, 2015, 16 (3), pp.206-12. ⟨10.1038/gene.2014.79⟩
Article dans une revue pasteur-01325818v1
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Differentiation-dependent susceptibility of human muscle cells to Zika virus infection

 Vincent Legros , Patricia Jeannin , Julien Burlaud-Gaillard , Thibault Chaze , Quentin Giai Gianetto , et al.
PLoS Neglected Tropical Diseases, 2020, 14 (8), pp.e0008282. ⟨10.1371/journal.pntd.0008282⟩
Article dans une revue hal-03184236v1
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