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Integron cassettes commonly integrate into bacterial genomes via widespread non-classical attG sites

 Céline Loot , Gael A Millot , Egill Richard , Eloi Littner , Claire Vit , et al.
Nature Microbiology, 2024, 9 (1), pp.228-240. ⟨10.1038/s41564-023-01548-y⟩
Article dans une revue pasteur-04384854v1
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Identification of genes involved in low aminoglycoside-induced SOS response in Vibrio cholerae: a role for transcription stalling and Mfd helicase.

 Z. Baharoglu , A. Babosan , D. Mazel
Nucleic Acids Research, 2014, 42 (4), pp.2366-2379. ⟨10.1093/nar/gkt1259⟩
Article dans une revue pasteur-01423602v1
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Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo identifies virulence-associated traits

 David Goudenège , Yannick Labreuche , Evelyne Krin , Dominique Ansquer , Sophie Mangenot , et al.
The International Society of Microbiologial Ecology Journal, 2013, Integrated genomics and post-genomics approaches in microbial ecology, 7 (10), pp.1985-1996. ⟨10.1038/ismej.2013.90⟩
Article dans une revue pasteur-01699814v1
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Cassette recombination dynamics within chromosomal integrons are regulated by toxin-antitoxin systems

 Egill Richard , Baptiste Darracq , Eloi Littner , Claire Vit , Clémence Whiteway , et al.
Science Advances , 2024, 10 (2), pp.eadj3498. ⟨10.1126/sciadv.adj3498⟩
Article dans une revue hal-04397951v1
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The Proximity of Ribosomal Protein Genes to oriC Enhances Vibrio cholerae Fitness in the Absence of Multifork Replication

 Alfonso Soler-Bistué , Michaël Timmermans , Didier Mazel
mBio, 2017, 8 (1), pp.e00097-17. ⟨10.1128/mBio.00097-17⟩
Article dans une revue pasteur-01689611v1
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Real-time tracking of bacterial membrane vesicles reveals enhanced membrane traffic upon antibiotic exposure

 Julia Bos , Luis Cisneros , Didier Mazel
Science Advances , 2021, 7 (4), pp.eabd1033. ⟨10.1126/sciadv.abd1033⟩
Article dans une revue pasteur-03242762v1
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Genetic drivers of chromosomal integron stability

 Egill Richard , Baptiste Darracq , Eloi Littner , Claire Vit , Clémence Whiteway , et al.
2022
Pré-publication, Document de travail pasteur-03824759v1
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Management of multipartite genomes: the Vibrio cholerae model.

 Marie-Eve Val , Alfonso Soler-Bistué , Michael J Bland , Didier Mazel
Current Opinion in Microbiology, 2014, 22, pp.120-6. ⟨10.1016/j.mib.2014.10.003⟩
Article dans une revue pasteur-01163283v1
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Engineered toxin–intein antimicrobials can selectively target and kill antibiotic-resistant bacteria in mixed populations

 Rocío López-Igual , Joaquin Bernal-Bayard , Alfonso Rodríguez-Patón , Jean-Marc Ghigo , Didier Mazel
Nature Biotechnology, 2019, 37 (7), pp.755-760. ⟨10.1038/s41587-019-0105-3⟩
Article dans une revue pasteur-02558499v1
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Exploring a unique class of flavoenzymes: Identification and biochemical characterization of ribosomal RNA dihydrouridine synthase

 Sabrine Toubdji , Quentin Thullier , Lea-Marie Kilz , Virginie Marchand , Yifeng Yuan , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2024, 121 (32), pp.e2401981121. ⟨10.1073/pnas.2401981121⟩
Article dans une revue hal-04734945v1
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SOS, the formidable strategy of bacteria against aggressions

 Zeynep Baharoglu , Didier Mazel
FEMS Microbiology Reviews, 2014, 38 (6), pp.1126-1145. ⟨10.1111/1574-6976.12077⟩
Article dans une revue pasteur-01423593v1
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Chromosomal Position of Ribosomal Protein Genes Affects Long-Term Evolution of Vibrio cholerae

 Leticia Larotonda , Damien Mornico , Varun Khanna , Joaquín Bernal-Bayard , Jean-Marc Ghigo , et al.
mBio, 2023, 14 (2), pp.e0343222. ⟨10.1128/mbio.03432-22⟩
Article dans une revue pasteur-04567331v1
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A checkpoint control orchestrates the replication of the two chromosomes of Vibrio cholerae.

 Marie-Eve Val , Martial Marbouty , Francisco de Lemos Martins , Sean P Kennedy , Harry Kemble , et al.
Science Advances , 2016, 2 (4), pp.e1501914. ⟨10.1126/sciadv.1501914⟩
Article dans une revue pasteur-01309592v1
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A qnr-plasmid allows aminoglycosides to induce SOS in Escherichia coli

 Anamaria Babosan , David Skurnik , Anaëlle Muggeo , Gerald Pier , Zeynep Baharoglu , et al.
eLife, 2022, 11, ⟨10.7554/eLife.69511⟩
Article dans une revue hal-03919325v1
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Aminoglycoside uptake, stress, and potentiation in Gram-negative bacteria: new therapies with old molecules

 Manon Lang , André Carvalho , Zeynep Baharoglu , Didier Mazel
Microbiology and Molecular Biology Reviews, 2023, ⟨10.1128/mmbr.00036-22⟩
Article dans une revue pasteur-04334889v1
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Differences in Integron Cassette Excision Dynamics Shape a Trade-Off between Evolvability and Genetic Capacitance

 Céline Loot , Aleksandra Nivina , Jean Cury , José Antonio Escudero , Magaly Ducos-Galand , et al.
mBio, 2017, 8 (2), pp.e02296-16. ⟨10.1128/mBio.02296-16⟩
Article dans une revue pasteur-01689524v1
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Multiple Pathways of Genome Plasticity Leading to Development of Antibiotic Resistance

 Zeynep Baharoglu , Geneviève Garriss , Didier Mazel
Antibiotics, 2013, Antibiotic Resistance, 2 (2), pp.288-315. ⟨10.3390/antibiotics2020288⟩
Article dans une revue pasteur-01691592v1
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Sleeping ribosomes: bacterial signaling triggers RaiA mediated persistence to aminoglycosides

 Manon Lang , Evelyne Krin , Chloé Korlowski , Odile Sismeiro , Hugo Varet , et al.
iScience, 2021, pp.103128. ⟨10.1016/j.isci.2021.103128⟩
Article dans une revue pasteur-03349141v1
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Cell cycle-coordinated maintenance of the Vibrio bipartite genome

 Théophile Niault , Jakub Czarnecki , Morgan Lambérioux , Didier Mazel , Marie-Eve Val
EcoSal Plus, 2023, 11 (1), eesp00082022. ⟨10.1128/ecosalplus.esp-0008-2022⟩
Article dans une revue hal-04653967v1
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The coordinated replication of Vibrio cholerae ’s two chromosomes required the acquisition of a unique domain by the RctB initiator

 Florian Fournes , Theophile Niault , Jakub Czarnecki , Alvise Tissier-Visconti , Didier Mazel , et al.
Nucleic Acids Research, 2021, 49 (19), pp.11119-11133. ⟨10.1093/nar/gkab903⟩
Article dans une revue hal-03500868v1
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Primary and promiscuous functions coexist during evolutionary innovation through whole protein domain acquisitions

 José Antonio Escudero , Aleksandra Nivina , Harry Kemble , Céline Loot , Olivier Tenaillon , et al.
eLife, 2020, 9, pp.e58061. ⟨10.7554/eLife.58061⟩
Article dans une revue hal-03084482v1
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Unmasking the ancestral activity of integron integrases reveals a smooth evolutionary transition during functional innovation

 Jose Antonio Escudero , Celine Loot , Vincent Parissi , Aleksandra Nivina , Christiane Bouchier , et al.
Nature Communications, 2016, 7, pp.Article number 10937. ⟨10.1038/ncomms10937⟩
Article dans une revue pasteur-01292328v1
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RadD Contributes to R-Loop Avoidance in Sub-MIC Tobramycin

 Veronica Negro , Evelyne Krin , Sebastian Aguilar Pierlé , Thibault Chaze , Quentin Giai Gianetto , et al.
mBio, 2019, 10 (4), pp.e01173-19. ⟨10.1128/mBio.01173-19⟩
Article dans une revue pasteur-02171194v1
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Fuse or die: how to survive the loss of Dam in Vibrio cholerae

 Marie-Eve Val , Sean Patrick Kennedy , Alfonso Soler-Bistué , Valérie Barbe , Christiane Bouchier , et al.
Molecular Microbiology, 2014, 91 (4), pp.665 - 678. ⟨10.1111/mmi.12483⟩
Article dans une revue inserm-01285641v1
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RpoS Plays a Central Role in the SOS Induction by Sub-Lethal Aminoglycoside Concentrations in Vibrio cholerae

 Zeynep Baharoglu , Evelyne Krin , Didier Mazel
PLoS Genetics, 2013, 9 (4), pp.e1003421. ⟨10.1371/journal.pgen.1003421⟩
Article dans une revue pasteur-01691109v1
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Systematic transcriptome analysis allows the identification of new type I and type II Toxin/Antitoxin systems located in the superintegron of Vibrio cholerae

 Evelyne Krin , Zeynep Baharoglu , Odile Sismeiro , Hugo Varet , Jean-Yves Coppée , et al.
Research in Microbiology, 2023, 174 (1-2), pp.103997. ⟨10.1016/j.resmic.2022.103997⟩
Article dans une revue pasteur-03889562v1
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Interplay between Sublethal Aminoglycosides and Quorum Sensing: Consequences on Survival in V. cholerae

 André Carvalho , Evelyne Krin , Chloé Korlowski , Didier Mazel , Zeynep Baharoglu
Cells, 2021, 10 (11), pp.3227. ⟨10.3390/cells10113227⟩
Article dans une revue pasteur-03443810v2
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A new route for integron cassette dissemination among bacterial genomes

 Céline Loot , Gael A Millot , Egill Richard , Claire Vit , Baptiste Darracq , et al.
2022
Pré-publication, Document de travail pasteur-03826688v1
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Macromolecular crowding links ribosomal protein gene dosage to growth rate in Vibrio cholerae

 Alfonso Soler-Bistué , Sebastián Aguilar-Pierlé , Marc Garcia-Garcerà , Marie-Eve Val , Odile Sismeiro , et al.
BMC Biology, 2020, 18 (1), pp.43. ⟨10.1186/s12915-020-00777-5⟩
Article dans une revue pasteur-02562489v1
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Identification of DNA binding motifs of the Mycobacterium tuberculosis PhoP/PhoR two-component signal transduction system.

 Mena Cimino , Christophe Thomas , Amine Namouchi , Sarah Dubrac , Brigitte Gicquel , et al.
PLoS ONE, 2012, 7 (8), pp.e42876. ⟨10.1371/journal.pone.0042876⟩
Article dans une revue pasteur-01234357v1
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